Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTCACAGATGGCCGGAAGAGACTC&AGTTTCTGTATGGTTGTTTGA
.....((((((((((..(((((((.&)))))))...)))))))))).
Details
MiRNAhsa-miR-12122
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2389,2410
Score0.923
Seed0
Au0.721
Energy-18.3
Binding len21
Me-13.899
Phylopstem3.4313206000000003
Phylopflank3.4288974825
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure