Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTGGAGAGGTGTACTCCCA&TGGGAGGCACCTCAGATTCTTAATCCAGC
.((((((((((((.((((((&)))))))))))))..........))))).
Details
MiRNAhsa-miR-12131
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1141,1170
Score0.846
Seed1
Au0.485
Energy-24.1
Binding len29
Me-4.65
Phylopstem3.0551472727272726
Phylopflank4.0201742075
Longest consecutive pairings13
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure