Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATACCTGCCAGGC
.(((((((.....((((((...&))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004363
GeneSymbolCEACAM5
Binding site1526,1542
Score0.846
Seed1
Au0.456
Energy-16.3
Binding len16
Me-13.553
Phylopstem2.0555714285714286
Phylopflank4.28425
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure