Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTAGAAGTGTATGTTAGGG
.(((((((((((..........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004365
GeneSymbolCETN3
Binding site1532,1552
Score0.865
Seed1
Au0.529
Energy-16.0
Binding len13
Me-6.908
Phylopstem4.77285909090909
Phylopflank5.052027355000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure