Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGGCAGCAGGGTGTGTCGGGG
.((((((((((..(((......&.)))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004371
GeneSymbolCOPA
Binding site23,45
Score1.0
Seed1
Au0.353
Energy-20.3
Binding len17
Me-8.429
Phylopstem3.58768
Phylopflank2.032825092434211
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure