Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGGCCTGCTATTCCCCTGAGTTCAAAGGTCAAATCTGCAGGGTCA
.(((((((((((((((((((.&))))))......................)))......)))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_004371
GeneSymbolCOPA
Binding site3642,3690
Score0.846
Seed1
Au0.515
Energy-27.8
Binding len48
Me-3.793
Phylopstem1.64147904893617
Phylopflank1.5672969662499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure