Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TACCAGGTGGCCAGGTG
(((((((.(((...(((.....&)))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004381
GeneSymbolATF6B
Binding site2190,2207
Score0.846
Seed1
Au0.412
Energy-16.6
Binding len17
Me-11.744
Phylopstem2.4501819999999994
Phylopflank3.4801270750000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure