Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACACTGCTGCCAGA
..((((((..((.((((((...&)))))).)).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004391
GeneSymbolCYP8B1
Binding site3200,3217
Score0.846
Seed1
Au0.5
Energy-17.8
Binding len17
Me-8.545
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure