Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTCAACCAGTCCTAGAGCCTGTAGCTGCT
..(((((((((((((.(((((&))))).))))).............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017029423
GeneSymbolRPS6KA6
Binding site3357,3390
Score1.0
Seed1
Au0.471
Energy-23.8
Binding len33
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure