Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACGTTGCCCGCCAGC
..(((((...(((((((((...&)))))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004496
GeneSymbolFOXA1
Binding site1567,1585
Score0.846
Seed0
Au0.353
Energy-19.4
Binding len18
Me-9.57
Phylopstem4.319244444444444
Phylopflank2.146587345
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure