Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGCCCAATGCCAGC
..(((((((....((((((...&)))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004513
GeneSymbolIL16
Binding site266,285
Score0.846
Seed1
Au0.441
Energy-17.5
Binding len19
Me-13.66
Phylopstem0.14439128571428572
Phylopflank0.07333856750000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure