Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTACTACACAGAAGAAGTGGTTTACGAAGAGGTGCCGGGA
.((((((((....((((((((.&.)))))))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004543
GeneSymbolNEB
Binding site225,267
Score0.923
Seed1
Au0.603
Energy-19.1
Binding len23
Me-12.497
Phylopstem2.9097638375
Phylopflank2.7889183575000005
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure