Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTACAGGCATGCTGCAAC
((((((((((..((((((...&))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017029555
GeneSymbolOPHN1
Binding site4946,4964
Score0.846
Seed1
Au0.588
Energy-17.8
Binding len18
Me-10.109
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure