Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCACTGTGTTAGCCAGGA
.(((((((((((.(((((....&))))).)))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004559
GeneSymbolYBX1
Binding site2292,2312
Score0.846
Seed1
Au0.559
Energy-19.2
Binding len20
Me-5.082
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure