Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCGACGTGTAGCCAGGG
.((((((.(((.((((.((...&)).))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004562
GeneSymbolPRKN
Binding site1485,1502
Score0.846
Seed1
Au0.294
Energy-18.1
Binding len17
Me-9.454
Phylopstem-1.1235761666666668
Phylopflank-0.42836225625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure