Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGGGCTGCGGCTGCGGC
((((((((((((((.(..(((&))).).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017029563
GeneSymbolPAK3
Binding site118,139
Score0.923
Seed1
Au0.132
Energy-25.2
Binding len21
Me-4.673
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure