Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&TGTGCCAGGAGTT
.......((((((((((((..&)))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_004571
GeneSymbolPKNOX1
Binding site3903,3916
Score0.846
Seed0
Au0.426
Energy-15.1
Binding len13
Me-17.11
Phylopstem3.2390259999999995
Phylopflank1.99841279875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure