Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCAGGGCTGGCTGTGCTGGGTTC
.(((((.((((((..(((.((&))..)))..))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_004571
GeneSymbolPKNOX1
Binding site4500,4524
Score0.923
Seed0
Au0.338
Energy-23.9
Binding len24
Me-6.929
Phylopstem-0.13723883333333334
Phylopflank0.49462843487499997
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure