Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGGAGGCTGTTCTGCCCTTCTCTCCTGCACTGGCTGAAGTGACGCTGGGCATTGGCCGTGGCCGCAGGGTCA
.((((((((.(((..((((..&.))))..........))).)))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_004584
GeneSymbolRAD9A
Binding site514,588
Score0.923
Seed1
Au0.338
Energy-26.2
Binding len28
Me-6.628
Phylopstem1.0283315625
Phylopflank2.294505425
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure