Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTCAGGCTCTGATGCTAGGC
.((((((((.((..((((((((&))))))...))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004586
GeneSymbolRPS6KA3
Binding site536,560
Score0.846
Seed1
Au0.632
Energy-17.0
Binding len24
Me-7.182
Phylopstem0.6046930363636364
Phylopflank1.9658578221250003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure