Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTACATTGTTGCCCCTACATAAGGA
.(((((((.(((((((((((..&)))))))))))))))........))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004593
GeneSymbolTRA2B
Binding site3744,3771
Score0.923
Seed1
Au0.662
Energy-17.9
Binding len27
Me-4.85
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure