Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGCCCTTCTGCGTTGTTATGCCAC
...((((((((((((((((...&.)))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004619
GeneSymbolTRAF5
Binding site3264,3289
Score0.885
Seed0
Au0.456
Energy-21.9
Binding len19
Me-6.515
Phylopstem-0.03496379411764709
Phylopflank-0.35672022750000004
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure