Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCAGAAAAAGCTCCAGAGACCTCACAGCATTGTAGGGCGGGGTG
((((.((.((((((((......&.))))))))..)).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004634
GeneSymbolBRPF1
Binding site4283,4330
Score0.846
Seed0
Au0.471
Energy-19.3
Binding len19
Me-10.37
Phylopstem1.2848339875
Phylopflank1.8305416787500002
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end2
Position3UTR
2D Structure