Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTG
((((((((..(((((.......&.)))))..))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004635
GeneSymbolMAPKAPK3
Binding site1666,1706
Score0.872
Seed1
Au0.441
Energy-19.0
Binding len18
Me-6.47
Phylopstem5.401586405555555
Phylopflank5.7227471325
Longest consecutive pairings5
Position of longest consecutive pairings12
Pairings in 3prime end1
Position3UTR
2D Structure