Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTACAGGGGCCGGGC
.((((((...(..(((((((..&)))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004643
GeneSymbolPABPN1
Binding site886,903
Score0.846
Seed1
Au0.382
Energy-18.6
Binding len17
Me-13.042
Phylopstem4.7903847142857146
Phylopflank5.401538717500001
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure