Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTAATCCCAAAGCAGTGGTCTTACAGCTGGGAGCTGACAC
.(((((((.(((((((((((.&.)))))))))))..))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017029642
GeneSymbolHDAC8
Binding site568,612
Score0.923
Seed1
Au0.5
Energy-22.4
Binding len23
Me-4.85
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure