Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCACGTTGTACTGATCCCAGGTT
((((((((((((((((.(((((&))))))))))))).))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004650
GeneSymbolPNPLA4
Binding site2113,2139
Score0.846
Seed1
Au0.647
Energy-19.3
Binding len26
Me-3.938
Phylopstem1.2636976450000001
Phylopflank2.3212992736249998
Longest consecutive pairings13
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure