Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTAATCCCAAAGCAGTGGTCTTACAGCTGGGAGCTGACAC
.(((((((.(((((((((((.&.)))))))))))..))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017029645
GeneSymbolHDAC8
Binding site541,585
Score0.846
Seed1
Au0.5
Energy-22.4
Binding len23
Me-4.85
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure