Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCTTCTCAGCTCACTCACGGCGGTTGCCAGGC
.(((((((..(...((((((((&))))))))...................)..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004666
GeneSymbolVNN1
Binding site3350,3388
Score0.846
Seed1
Au0.529
Energy-18.9
Binding len38
Me-11.585
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end8
Position3UTR
2D Structure