Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGTGTGCACCAGGTC
((((((((((((..((((....&)))))))))))..))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017029684
GeneSymbolSHROOM4
Binding site13116,13135
Score0.923
Seed1
Au0.544
Energy-18.0
Binding len19
Me-6.084
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure