Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCTTGGGGAGGAGGTGGA
..(((.((((((((((((((((&)))))))..))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_017029684
GeneSymbolSHROOM4
Binding site4236,4259
Score0.846
Seed0
Au0.471
Energy-26.3
Binding len23
Me-6.858
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end8
PositionCDS
2D Structure