Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTACATTGCTGGGGGTTACCGCAGGTGCC
..(((.((((((((((((((.&)))))))............))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017029684
GeneSymbolSHROOM4
Binding site5408,5439
Score1.0
Seed0
Au0.456
Energy-22.8
Binding len31
Me-6.858
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings24
Pairings in 3prime end7
Position3UTR
2D Structure