Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAAGGTCAACTGTAGCAGCAGG
((((.(((((((((((((((.&))))).....)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017029684
GeneSymbolSHROOM4
Binding site6318,6344
Score1.0
Seed0
Au0.529
Energy-22.5
Binding len26
Me-8.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure