Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCGTGCAGCCCAGCAGCAGA
((((.((((.(((((((.((.&)).))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017029684
GeneSymbolSHROOM4
Binding site3554,3574
Score0.923
Seed0
Au0.426
Energy-20.9
Binding len20
Me-9.299
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure