Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGACCATGCCAGGC
.((((((((....(((((....&)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004699
GeneSymbolFAM50A
Binding site1199,1216
Score0.923
Seed1
Au0.279
Energy-18.4
Binding len17
Me-12.497
Phylopstem4.8945355
Phylopflank4.84824545375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure