Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGATGGGCTGGGGGAGTTGAGAGTGT
((((((((((((((((((((((&)))))))))).......))))))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001346083
GeneSymbolCNTN2
Binding site5985,6018
Score0.846
Seed1
Au0.471
Energy-27.2
Binding len33
Me-3.938
Phylopstem-0.41554442062499997
Phylopflank-0.12373115550000002
Longest consecutive pairings10
Position of longest consecutive pairings23
Pairings in 3prime end8
Position3UTR
2D Structure