Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCGGACATCCACCATGGGGACAGCCACCAGGAGGAAGCCAC
...(((((((((((((((((((&)))))))))).........................))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001346083
GeneSymbolCNTN2
Binding site162,208
Score0.846
Seed0
Au0.368
Energy-25.4
Binding len46
Me-6.515
Phylopstem0.2309581511111111
Phylopflank0.23040655500000007
Longest consecutive pairings10
Position of longest consecutive pairings36
Pairings in 3prime end8
Position5UTR
2D Structure