Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCCAGGA
.(((((((((............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004738
GeneSymbolVAPB
Binding site3541,3551
Score0.846
Seed1
Au0.515
Energy-15.7
Binding len10
Me-13.079
Phylopstem5.8461638888888885
Phylopflank5.642972073749999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure