Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGAAGGAGCCAGCCCAGACCTGAGGAGGAGGATGCAGGGG
...(((((((.(((((((((.&)))))))))..........................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_004758
GeneSymbolTSPOAP1
Binding site3152,3195
Score0.846
Seed0
Au0.353
Energy-26.9
Binding len43
Me-9.339
Phylopstem4.794742333333333
Phylopflank4.730034292499999
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure