Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGTGCCCGGGCCGGAGTGGTGCCCAGCCAGCTGCGGGTCC
.(((((.(((((...((((((&))))))...........................)))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_004758
GeneSymbolTSPOAP1
Binding site3502,3546
Score0.846
Seed0
Au0.324
Energy-25.8
Binding len44
Me-8.218
Phylopstem0.5355585166666667
Phylopflank0.7917300387500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure