Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGTACCTCTGGTGTGTCAGGG
.((((((((((...(((.((..&)).))).....)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004775
GeneSymbolB4GALT6
Binding site2121,2143
Score0.846
Seed1
Au0.603
Energy-17.9
Binding len22
Me-9.286
Phylopstem1.7713
Phylopflank2.1247000000000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure