Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTGCTGTGCCAGGG
.(((((((((....(((.((..&)).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_203385
GeneSymbolRNH1
Binding site809,825
Score0.846
Seed1
Au0.338
Energy-17.3
Binding len16
Me-12.111
Phylopstem-0.5235325622222222
Phylopflank0.14473558449999996
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure