Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTGCTGTGCCAGGG
.(((((((((....(((.((..&)).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_203387
GeneSymbolRNH1
Binding site952,968
Score0.846
Seed1
Au0.338
Energy-17.3
Binding len16
Me-12.111
Phylopstem-0.5291927111111111
Phylopflank-0.5769990875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure