Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACAGTAACTGCCAGGG
.(((((((.....((((((...&)))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_203487
GeneSymbolPCDH9
Binding site2309,2328
Score0.846
Seed1
Au0.529
Energy-18.5
Binding len19
Me-13.553
Phylopstem5.65548
Phylopflank6.735004196250001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure