Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GCGTGGCAAAGGTAAC
.....(((((((((.(((((.&))))).))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_205842
GeneSymbolNCKAP1
Binding site5645,5661
Score0.923
Seed0
Au0.544
Energy-19.1
Binding len16
Me-14.401
Phylopstem0.5697246666666665
Phylopflank-0.06944476375000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure