Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CATCGTTATGCCAGGC
.((((((((((.(((.......&))).)).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001346114
GeneSymbolFNIP1
Binding site1643,1659
Score0.846
Seed1
Au0.603
Energy-16.7
Binding len16
Me-7.373
Phylopstem0.7655919363636364
Phylopflank0.82230449375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure