Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCTGCTGCACTGCGAA
((((((.((((((.((.((((&))))..)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024446047
GeneSymbolSMAD5
Binding site536,558
Score0.923
Seed0
Au0.338
Energy-22.6
Binding len22
Me-6.338
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure