Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCGGGAGGGTCAGAGACTTTCAGGCCGGG
..(((((((((((((((((...&))))))))))).............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_024446074
GeneSymbolPAM
Binding site67,98
Score0.846
Seed1
Au0.338
Energy-22.4
Binding len31
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings20
Pairings in 3prime end5
Position5UTR
2D Structure