Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTCCGTGGGAACCACGAGTGTGCCAGC
..(((((((((..(((......&.))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_206873
GeneSymbolPPP1CA
Binding site301,331
Score0.846
Seed1
Au0.485
Energy-15.6
Binding len15
Me-9.593
Phylopstem1.3290034444444447
Phylopflank1.07725423625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure