Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCGAGGCGGAGAAGAAGCCGACGAGTGCCCTGGATGAGCCAGTGT
(((((((((..(((.(((((..&.))))).))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_024446222
GeneSymbolCLPTM1L
Binding site38,83
Score0.846
Seed1
Au0.324
Energy-26.8
Binding len21
Me-8.74
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure